pharmacogenomics-guidelines-mcp-server

io.github.cyanheads/pharmacogenomics-guidelines-mcp-serverVersion 0.3.0

Find pharmacogenomics guidelines, translate diplotypes, and retrieve prescribing recommendations.

Status

Responds559 msNov 14, 2026, 14:48 UTCAnswered our handshake without sign-in.

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Last checked: Nov 14, 2026, 14:48 UTC
Latency: 559 ms
Remotes responding: 1 of 1
Sign-in: No sign-in
Hosting: Hosted outside the EU (detected)
Registry data as of: Nov 14, 2026, 22:14 UTC

Data from the official MCP Registry, checked by run.zero. How we check

Connect

Streamable HTTP

https://pharmacogenomics-guidelines.caseyjhand.com/mcpResponds559 msNov 14, 2026, 14:48 UTC

No sign-in

Claude Code

claude mcp add --transport http pharmacogenomics-guidelines-mcp-server https://pharmacogenomics-guidelines.caseyjhand.com/mcp

Claude Desktop and claude.ai

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Settings > Connectors > Add custom connector
Name: pharmacogenomics-guidelines-mcp-server
Remote MCP server URL: https://pharmacogenomics-guidelines.caseyjhand.com/mcp

Cursor

{
  "mcpServers": {
    "pharmacogenomics-guidelines-mcp-server": {
      "url": "https://pharmacogenomics-guidelines.caseyjhand.com/mcp"
    }
  }
}

VS Code

code --add-mcp '{"name":"pharmacogenomics-guidelines-mcp-server","type":"http","url":"https://pharmacogenomics-guidelines.caseyjhand.com/mcp"}'

Streamable HTTP

npm: @cyanheads/pharmacogenomics-guidelines-mcp-server 0.3.0

Package only

npm (npx)

claude mcp add pharmacogenomics-guidelines-mcp-server -- npx -y @cyanheads/pharmacogenomics-guidelines-mcp-server@0.3.0

Streamable HTTP

npm: @cyanheads/pharmacogenomics-guidelines-mcp-server 0.3.0

Package only

npm (npx)

claude mcp add pharmacogenomics-guidelines-mcp-server -- npx -y @cyanheads/pharmacogenomics-guidelines-mcp-server@0.3.0

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Tools

6 tools

Tools of pharmacogenomics-guidelines-mcp-server
	Description		Read-only	Idempotent	Open world
`pgx_get_guideline`Retrieve guideline coverage by source ID, exact gene symbol or exact drug name/ID. Default summary pages complete guideline records with exact drugCount/pairCount. view=drugs or pairs requires by=id and pages only that related collection, retaining its guideline descriptor. Ambiguous drug names page candidates for retry with drugId. Follow page.nextOffset; the 24,000-byte soft budget cuts only between complete rows, with oversizedRow for an indivisible exception. Missing coverage is found=false. Consult linked guidelines before clinical use.	Retrieve guideline coverage by source ID, exact gene symbol or exact drug name/ID. Default summary pages complete guideline records with exact drugCount/pairCount. view=drugs or pairs requires by=id and pages only that related collection, retaining its guideline descriptor. Ambiguous drug names page candidates for retry with drugId. Follow page.nextOffset; the 24,000-byte soft budget cuts only between complete rows, with oversizedRow for an indivisible exception. Missing coverage is found=false. Consult linked guidelines before clinical use.	Not declared	Yes	Yes	Yes
`pgx_get_recommendations`Browse CPIC recommendations in drug mode with one exact drugName or drugId. Match across drugs in results mode with geneResults or geneSymbol plus phenotype/activityScore, or genotype mode with 1–10 uniquely resolved gene/diplotype entries. Both matching modes accept an optional drug. Optional view=test_alerts selects complete example CDS alerts instead of recommendations, without joins; default view=recommendations. Alert records retain ordered alerttext, No CDS and n/a. Use pgx_list_reference topic phenotypes for source values. Every matched prerequisite must be explicit; omitted genes are never normal, negative or No Result. Preserve populations, scores, classifications and source text. Follow page.nextOffset and incompletePage.nextOffset independently for the selected collection and missing-gene diagnostics; consult source guidelines before clinical use.	Browse CPIC recommendations in drug mode with one exact drugName or drugId. Match across drugs in results mode with geneResults or geneSymbol plus phenotype/activityScore, or genotype mode with 1–10 uniquely resolved gene/diplotype entries. Both matching modes accept an optional drug. Optional view=test_alerts selects complete example CDS alerts instead of recommendations, without joins; default view=recommendations. Alert records retain ordered alerttext, No CDS and n/a. Use pgx_list_reference topic phenotypes for source values. Every matched prerequisite must be explicit; omitted genes are never normal, negative or No Result. Preserve populations, scores, classifications and source text. Follow page.nextOffset and incompletePage.nextOffset independently for the selected collection and missing-gene diagnostics; consult source guidelines before clinical use.	Not declared	Yes	Yes	Yes
`pgx_list_reference`Inspect gene symbols, gene-specific source results, CPIC levels, ClinPGx testing labels, recommendation classifications and input formats. phenotypes requires geneSymbol and preserves distinct activity-score rows, frequencies and consultation text. Live genes/phenotypes support paging; static topics return their complete vocabulary without upstream requests. Use returned values in subsequent discovery, diplotype and recommendation calls.	Inspect gene symbols, gene-specific source results, CPIC levels, ClinPGx testing labels, recommendation classifications and input formats. phenotypes requires geneSymbol and preserves distinct activity-score rows, frequencies and consultation text. Live genes/phenotypes support paging; static topics return their complete vocabulary without upstream requests. Use returned values in subsequent discovery, diplotype and recommendation calls.	Not declared	Yes	Yes	Yes
`pgx_lookup_diplotype`Translate a CPIC-supported diplotype or allele-status result for one gene. Supply geneSymbol and exact diplotype notation, including star alleles, named HLA positive/negative statuses, or non-star sequences; use pgx_search_alleles and pgx_list_reference with topic phenotypes to inspect supported values. Exact lookup precedes bounded reverse-order or status aliases. Multiple source rows remain ambiguous; no activity score or missing gene result is inferred.	Translate a CPIC-supported diplotype or allele-status result for one gene. Supply geneSymbol and exact diplotype notation, including star alleles, named HLA positive/negative statuses, or non-star sequences; use pgx_search_alleles and pgx_list_reference with topic phenotypes to inspect supported values. Exact lookup precedes bounded reverse-order or status aliases. Multiple source rows remain ambiguous; no activity score or missing gene result is inferred.	Not declared	Yes	Yes	Yes
`pgx_search_alleles`Inspect CPIC allele function, evidence, definition metadata and complete population frequencies for geneSymbol. Name matches literally first, then a matching gene prefix before a star allele may be removed; clinicalFunctionalStatus matches literal text case-insensitively. Discover genes with pgx_list_reference. Definitions are metadata, not variant interpretation. Frequencies are source fractions; inferred frequencies are not observations and do not establish individual risk. Pages have a 24,000-byte complete-result soft budget; an indivisible exception sets oversizedRow. Continue with page.nextOffset.	Inspect CPIC allele function, evidence, definition metadata and complete population frequencies for geneSymbol. Name matches literally first, then a matching gene prefix before a star allele may be removed; clinicalFunctionalStatus matches literal text case-insensitively. Discover genes with pgx_list_reference. Definitions are metadata, not variant interpretation. Frequencies are source fractions; inferred frequencies are not observations and do not establish individual risk. Pages have a 24,000-byte complete-result soft budget; an indivisible exception sets oversizedRow. Continue with page.nextOffset.	Not declared	Yes	Yes	Yes
`pgx_search_pairs`Search evaluated gene–drug pairs by gene, literal drug-name substring, exact drug/RxNorm/ATC identifiers, evaluation level or testing label. Filters combine with AND; identifiers never fall back to name-only search. Results include source drug identifiers and guideline links for pgx_get_guideline. A pair evaluation is not a prescribing recommendation. Follow nextOffset to continue.	Search evaluated gene–drug pairs by gene, literal drug-name substring, exact drug/RxNorm/ATC identifiers, evaluation level or testing label. Filters combine with AND; identifiers never fall back to name-only search. Results include source drug identifiers and guideline links for pgx_get_guideline. A pair evaluation is not a prescribing recommendation. Follow nextOffset to continue.	Not declared	Yes	Yes	Yes

Details

Registry status: Active
Published: Oct 28, 2026
Updated: Oct 28, 2026
Website: Not given
Repository: https://github.com/cyanheads/pharmacogenomics-guidelines-mcp-server⁠ (opens in a new tab)
Categories (suggested): Search and webSuggested categories are assigned automatically from the registry text and may be wrong. Verified operators can correct them.
GDPR: Not declared

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